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Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics and phylogeography studies
ArticleAbstract: Biodiversity, phylogeography and population genetic studies will be revolutionized by access to largPalabras claves:DNA probes, Long-range PCR, MiSeq, next-generation sequencing, Plastomes, Whole chloroplast sequencingAutores:Barnaud A., Billot C., Faye A., Kougbeadjo A., Maillol V., Mariac C., Martin G., Pouzadou J., Sabot F., Santoni S., Scarcelli N., Thomas L.P. Couvreur, Vigouroux Y.Fuentes:scopusIntra-individual polymorphism in chloroplasts from NGS data: Where does it come from and how to handle it?
ArticleAbstract: Next-generation sequencing allows access to a large quantity of genomic data. In plants, several stuPalabras claves:Chloroplast, gatk, Intra-individual polymorphism, NGS, samtools, SNPAutores:Berthouly-Salazar C., Faye A., Mariac C., Richard D., Sabot F., Scarcelli N., Thomas L.P. Couvreur, Vigouroux Y.Fuentes:scopusLong-fragment targeted capture for long-read sequencing of plastomes
ArticleAbstract: Premise: Third-generation sequencing methods generate significantly longer reads than those producedPalabras claves:De novo assembly, DNA probes, Long-range PCR, MinION, whole plastome sequencingAutores:Ardisson M., Bethune K., Couderc M., Klein V., Mariac C., Martin J.F., Rommel Montufar, Sabot F., Santoni S., Scarcelli N., Thomas L.P. Couvreur, Vigouroux Y.Fuentes:googlescopus