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Atom Types Independent Molecular Mechanics Method for Pbkp_redicting the Conformational Energy of Small Molecules
ArticleAbstract: We previously implemented a well-known qualitative chemical principle into an accurate quantitativePalabras claves:Autores:Labute P., Liu Z., Moitessier N., Shahamat M., Stephen Jones BarigyeFuentes:scopusDevelopment of an in silico model of DPPH free radical scavenging capacity: Pbkp_rediction of antioxidant activity of coumarin type compounds
ArticleAbstract: A quantitative structure-activity relationship (QSAR) study of the 2,2-diphenyl-l-picrylhydrazyl (DPPalabras claves:antioxidant, artificial neural networks, coumarin, Dpph, Free radical scavenger, MLP, QSARAutores:Jorge E.G., Rayar A.M., Rodríguez M.E.J., Stephen Jones Barigye, Veítia M.S.I.Fuentes:scopusExploring MIA-QSPR's for the modeling of biomagnification factors of aromatic organochlorine pollutants
ArticleAbstract: Biomagnification of organic pollutants in food webs has been usually associated to hydrophobicity anPalabras claves:Biomagnification, MIA-QSPR, MLR, Organochlorine pollutants, ValidationAutores:da Mota E.G., Duarte M.H., Freitas M.P., Ramalho T., Stephen Jones BarigyeFuentes:scopusElucidating the aryl hydrocarbon receptor antagonism from a chemical-structural perspective
ArticleAbstract: The aryl hydrocarbon receptor (AhR) plays an important role in several biological processes such asPalabras claves:AhR antagonist, CALUX, linear discriminant analysis, POP, QSAR, toxicophoreAutores:Doan T.Q., Giner R.M., Gozalbes R., Jorge E.G., Muller M., Scippo M.L., Stephen Jones BarigyeFuentes:scopusMulti-objective Optimization of Benzamide Derivatives as Rho Kinase Inhibitors
ArticleAbstract: Despite recent advances in Computer Aided Drug Discovery and High Throughput Screening, the attritioPalabras claves:4D-QSAR, Benzamide, Boosting Trees, Protein-ligand Docking, ROCK2, Virtual ScreeningAutores:Cardoso Gajo G., da Cunha E., Silva D.R., Stephen Jones BarigyeFuentes:scopusN-linear algebraic maps for chemical structure codification: A suitable generalization for atom-pair approaches?
ArticleAbstract: The present manuscript introduces, for the first time, a novel 3D-QSAR alignment free method (QuBiLSPalabras claves:3D Three-linear and four-linear indices, aggregation operator, Cramer's steroid, N-tuple simple stochastic and mutual probability matrices, N-tuple spatial-(Dis)similarity matrix, Principal Component Analysis, QSAR, QuBiLS-MIDAS N-tuples, Shannon entropy, ToMoCoMD-CARDD, Variability analysisAutores:César R. García-Jacas, Olivero-Verbel J., Rivera-Borroto O.M., Stephen Jones Barigye, Valdés-Martiní J.R., Yovani Marrero-PonceFuentes:scopusUse of Extended-Hückel Descriptors for Rapid and Accurate Pbkp_redictions of Conjugated Torsional Energy Barriers
ArticleAbstract: Over the past few decades, virtual high-throughput screening (vHTS) and molecular dynamics simulatioPalabras claves:Autores:Champion C., Labute P., Liu Z., Moitessier N., Stephen Jones Barigye, Wei W.Fuentes:scopusQSRR pbkp_rediction of gas chromatography retention indices of essential oil components
ArticleAbstract: A comprehensive and largest (to the best of our knowledge) database of 791 essential oil componentsPalabras claves:artificial neural networks, Essential oil, Gas chromatography, multiple linear regression, Quantitative structure–retention relationships, Retention indexAutores:Jorge-Rodríguez M.E., Stephen Jones Barigye, Tran-Thi-Thu T., Yovani Marrero-PonceFuentes:scopusPbkp_rediction of aquatic toxicity of benzene derivatives using molecular descriptor from atomic weighted vectors
ArticleAbstract: Several descriptors from atom weighted vectors are used in the pbkp_rediction of aquatic toxicity ofPalabras claves:aggregation operator, Aquatic toxicity, Atom weighted vector, molecular descriptor, multiple linear regression, Variability analysisAutores:Garit J., Green J.R., Oscar Martínez Santiago, Stephen Jones Barigye, Yoan Martínez López, Yovani Marrero-PonceFuentes:scopus