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Emergence and widespread circulation of a recombinant SARS-CoV-2 lineage in North America
ArticleAbstract: Although recombination is a feature of coronavirus evolution, previously detected recombinant lineagPalabras claves:Molecular epidemiology, phylogenetics, Recombination, SARS-COV-2Autores:Bernardo M. Gutierrez, Castelán-Sánchez H.G., da Silva Candido D., Delaye L., Escalera-Zamudio M., Faria N.R., Fleishon S., Houzet R., Jackson B., Pybus O.G., Rambaut A., Ruis C.Fuentes:scopusEarly genomic detection of cosmopolitan genotype of dengue virus serotype 2, Angola, 2018
ArticleAbstract: We used portable genome sequencing to investigate reported dengue virus transmission in Angola. OurPalabras claves:Autores:Afonso J.M., Bernardo M. Gutierrez, Cândido A.L.M., Clemente C., da Silva S.P., de Oliveira T., de Vasconcelos J.N., Faria N.R., Hill S.C., Jandondo D., Mirandela M., Neto Z., Pybus O.G., Sebastião C.D.S., Thézé J.Fuentes:scopusParallel evolution in the emergence of highly pathogenic avian influenza A viruses
ArticleAbstract: Parallel molecular evolution and adaptation are important phenomena commonly observed in viruses. HePalabras claves:Autores:Bernardo M. Gutierrez, Bowden T.A., Carrique L., Escalera-Zamudio M., Golden M., Keown J.R., Pybus O.G., Thézé J.Fuentes:scopusParallel molecular evolution and adaptation in viruses
ReviewAbstract: Parallel molecular evolution is the independent evolution of the same genotype or phenotype from disPalabras claves:Autores:Bernardo M. Gutierrez, Escalera-Zamudio M., Pybus O.G.Fuentes:scopusRecurrent emergence of SARS-CoV-2 spike deletion H69/V70 and its role in the Alpha variant B.1.1.7
ArticleAbstract: We report severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike ΔH69/V70 in multiple inPalabras claves:Alpha variant, antibody escape, B.1.1.7, covid-19, deletion, infectivity, neutralizing antibodies, RESISTANCE, SARS-COV-2, spike mutationAutores:Aanensen D.M., Aggarwal D., Alderton A., Amato R., Andersson M.I., Ariani C.V., Awan A.R., Barrett J., Bashton M., Bassett A.R., Bernardo M. Gutierrez, Bonsall D., Bucca G., Bull M., Chand M., Chapman M.H.S., Chauhan A.J., Collier D.A., Connor T.R., Constantinidou C., Corden S., Cottrell S., Curran M.D., Darby A.C., Datir R.P., de Silva T.I., Dewar R., Elliott S., Fairley D.J., Ferreira I.A.T.M., Gallo G., Glaysher S., Golubchik T., Goncalves S., Hamilton W.L., Harrison E.M., Harvey W.T., Hassan-Ibrahim M.O., Hiscox J.A., Holden M.T.G., Jackson D.K., Jahun A.S., Jesudason N.G., Johnston I., Kemp S.A., Kwiatkowski D.P., Langford C.F., Lawniczak M., Li K.K., Livett R., Loman N.J., Loose M.W., Loveson K.F., Lowe H., Ludden C., Lytras S., Marelli S., Martincorena I., Martinez Nunez R.T., McCann C.M., McHugh M.P., McKenna J.P., McMurray C., Meng B., Mlcochova P., Mohamed A., Moore C., Moses S., Nelson A., Nicholls S.M., Osman H., O’Grady J., Pacchiarini N., Page A.J., Pandey S., Papa G., Parker M.D., Parmar S., Paterson S., Prieto J.A., Pybus O.G., Rambaut A., Robson S.C., Saeed K., Shah R.N., Shepherd J.G., Sillitoe J., Smith C.P., Smith D.L., Snell L.B., Taha Y., Templeton K.E., Thakur N., Thomson E.C., Torok M.E., Underwood A.P., Unnikrishnan M., Volz E.M., Wang D., Watkins J., Young G.R.Fuentes:scopusSARS-CoV-2 evolution during treatment of chronic infection
ArticleAbstract: The spike protein of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is critical for viPalabras claves:Autores:Baker S., Bergamaschi L., Bernardo M. Gutierrez, Betancourt A., Bower G., Bucke A., Bullman B., Bunclark K., Calder J., Canna L., Chandra A., Collier D.A., Cossetti C., Datir R.P., de Bie E.M.D.D., de Sa A., Domingo J., Dougan G., Dunmore B.J., Elmer A., Emma Jones, Epping M., Fawke S., Ferreira I.A.T.M., Fuller S., Gayed S., Gleadall N., Graf S., Grenfell R., Harris J., Hess C., Hewitt S., Hinch A., Hodgson J., Hosmillo M., Huang C., Huhn O., Hunter K., Jackson S., Jahun A.S., Jarvis I., Jose S., Josipovic M., Kemp S.A., Kennet J., Kingston N., Kourampa J., Legchenko E., Lehner P.J., Lewis D., Lumb I.U., Lyons P.A., Mackay M., Marsden J., Martin J., Matara C., Matheson N.J., Meadows A., Mescia F., Mlcochova P., Nice F., Okecha G., Omarjee O., Owehand W.H., O’Brien C., O’Donnell C., Perera M., Pointon L., Pond N., Price J., Publico C., Rastall R., Rees-Spear C., Ribeiro C., Richoz N., Roberts D.J., Romashova V., Rossi S., Rowlands J., Ruffolo V., Saunders C., Sharma R., Shih J., Stefanucci L., Stephens J., Strezlecki M., Summers C., Sutcliffe R., Temperton N.J., Thaventhiran J.E.D., Tilly T., Tong Z., Tordesillas H., Toshner M., Treacy C., Turner L., Weekes M.P., Wood J., Wylot M., Yarkoni N.S.Fuentes:scopusSARS-CoV-2 lineage dynamics in England from September to November 2021: high diversity of Delta sub-lineages and increased transmissibility of AY.4.2
ArticleAbstract: Background: Since the emergence of SARS-CoV-2, evolutionary pressure has driven large increases in tPalabras claves:covid-19, Delta variant, GENETIC DIVERSITY, mutation, SARS-COV-2, Transmission advantageAutores:Aanensen D.M., Aggarwal D., Amato R., Ariani C.V., Atchison C., Barrett J.C., Bashton M., Beckett A.H., Beckwith S.M., Bernardo M. Gutierrez, Bodinier B., Bonsall D., Bucca G., Bull M., Burns P.J., Byott M., Carabelli A.M., Chand M., Connor T.R., Corden S., Cortes N., Cottrell S., Curran M.D., Darby A.C., De Angelis D., de Oliveira Martins L., de Silva T.I., Eales O., Eastick K., Fairley D.J., Frampton D., Glaysher S., Golubchik T., Goncalves S., Goodfellow I.G., Gunson R.N., Gupta R.K., Hamilton W.L., Harrison E.M., Hassan-Ibrahim M.O., Haw D., Holden M.T.G., Houlihan C., Jackson D.K., Jackson L.M., Johnston I., Jonnerby J., Kwiatkowski D.P., Langford C.F., Levett L.J., Liggett S., Lillie P.J., Livett R., Loman N.J., Loose M.W., Loveson K.F., Ludden C., Lythgoe K., Mahungu T.W., Moore C., Moore N., Moses S., Murray A., Nastouli E., Nebbia G., Nicholls S.M., Nunez R.T.M., Osman H., O’Grady J., Pacchiarini N., Page A.J., Parker M.D., Parmar S., Paterson S., Pope C.F., Prieto J.A., Pybus O.G., Rambaut A., Randell P., Robson S.C., Rogan F., Saeed K., Shepherd J.G., Sheridan L.A., Sillitoe J., Simpson D.A., Singleton D., Smith C.P., Smith D.L., Snell L.B., Templeton K.E., Thomas C., Thomson E.C., Torok M.E., Underwood A.P., Volz E.M., Wang D., Wang H., Watkins J., Williams C., Witney A.A.Fuentes:scopusPublisher Correction: Parallel evolution in the emergence of highly pathogenic avian influenza A viruses (Nature Communications, (2020), 11, 1, (5511), 10.1038/s41467-020-19364-x)
OtherAbstract: The original version of this Article was pdated shortly after publication, because the SupplementaryPalabras claves:Autores:Bernardo M. Gutierrez, Bowden T.A., Carrique L., Escalera-Zamudio M., Golden M., Keown J.R., Pybus O.G., Thézé J.Fuentes:scopusSpatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence
ArticleAbstract: Understanding the causes and consequences of the emergence of severe acute respiratory syndrome coroPalabras claves:Autores:Aanensen D.M., Baele G., Bajaj S., Battle A.L., Bernardo M. Gutierrez, Cauchemez S., Colquhoun R., Dellicour S., du Plessis L., Faria N.R., Hill V., Jackson B., Klein B., Kraemer M.U.G., Loman N.J., McCrone J.T., O'Toole Á., Parag K.V., Pybus O.G., Rambaut A., Ruis C., Scarpino S.V., Vespignani A., Volz E.M.Fuentes:scopusFirst detection of SARS-CoV-2 variant B.1.1.529 (Omicron) in Ecuador
ArticleAbstract: The National Institute of Research and Public Health reported the first local record of the OmicronPalabras claves:covid-19, Genomics, Omicron, SARS-COV-2, variant of concernAutores:Andrés Carrazco-Montalvo, Ariana León-Sosa, Belén Prado-Vivar, Bernardo M. Gutierrez, Fuertes B., Gabriel Antonio Trueba Piedrahita , Guizado-Herrera D., Isaac Armendáriz-Castillo, Juan José Guadalupe, Michelle Grunauer Andrade, Morales D., Patino L., Patricio Rojas-Silva, Paul Andres Cardenas, Ramos-Sarmiento D., Rubén Armas-Gonzalez, Sully Márquez, Tello C.L., Verónica Barragán, Wong M.B.Fuentes:scopus