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3D-QSAR methodologies and molecular modeling in bioinformatics for the search of novel anti-HIV therapies: Rational design of entry inhibitors
ReviewAbstract: Human immunodeficiency virus (HIV) is the responsible causal agent of acquired immunodeficiency syndPalabras claves:3D-QSAR, Anti-HIV, CCR5, CXCR4, Fragments, Gp120, Homology modeling, linear discriminant analysis, Molecular docking, QSAR, quantitative contributionsAutores:Alejandro Speck-Planche, Kleandrova V.V., Natalia Dias Soeiro Cordeiro M., Scotti M.T.Fuentes:scopusA ligand-based approach for the in silico discovery of multi-target inhibitors for proteins associated with HIV infection
ArticleAbstract: Acquired immunodeficiency syndrome (AIDS) is a dangerous disease, which damages the immune system cePalabras claves:Autores:Alejandro Speck-Planche, Kleandrova V.V., Luan F., Natalia Dias Soeiro Cordeiro M.Fuentes:scopusA probabilistic strategy of data fusion for the classification and virtual screening of anticoccidial drug candidates
ArticleAbstract: In the present work, Dempster-Shafer Theory (DST) was employed for the implementation of a combinedPalabras claves:Anticoccidial drugs, Belief theory, chemoinformatics, Consensus pbkp_rediction, Dempster-Shafer Theory, QSARAutores:Borges F., Dominguez E.R., Escobar-Roman R., Maykel Cruz-Monteagudo, Natalia Dias Soeiro Cordeiro M., Olazabal-Rios R.Fuentes:scopusChemoinformatics profiling of the chromone nucleus as a MAO-B/A<inf>2A</inf>AR dual binding scaffold
ArticleAbstract: Background: In the context of the current drug discovery efforts to find disease modifying therapiesPalabras claves:A adenosine receptor 2A, chemoinformatics, Chromones, Dual-target binder, Monoamine Oxidase B, Parkinson’s DiseaseAutores:Aminael Sánchez-Rodríguez, Borges F., Cesar Paz-y-Miño, Eduardo Tejera, Maykel Cruz-Monteagudo, Morales-Helguera A., Natalia Dias Soeiro Cordeiro M., Perera-Sardiña Y., Yunierkis Perez-CastilloFuentes:googlescopusCompScore: Boosting Structure-Based Virtual Screening Performance by Incorporating Docking Scoring Function Components into Consensus Scoring
ArticleAbstract: Consensus scoring has become a commonly used strategy within structure-based virtual screening (VS)Palabras claves:Autores:Aminael Sánchez-Rodríguez, Borges F., Eduardo Tejera, Karina Beatríz Jimenes-Vargas, Mario González-Rodríguez, Maykel Cruz-Monteagudo, Natalia Dias Soeiro Cordeiro M., Stellamaris Sotomayor-Burneo, Vinicio Danilo Armijos-Jaramillo, Yunierkis Perez-CastilloFuentes:scopusComputer-aided drug design methodologies toward the design of anti-hepatitis C agents
ReviewAbstract: Hepatitis C constitutes an infectious disease that causes severe damages to the liver, and is causedPalabras claves:3D-QSAR, Anti-HCV agents, Fragments, linear discriminant analysis, QSAR, Structure-based drug designAutores:Alejandro Speck-Planche, Natalia Dias Soeiro Cordeiro M.Fuentes:scopusConsensus strategy in genes prioritization and combined bioinformatics analysis for preeclampsia pathogenesis
ArticleAbstract: Background: Preeclampsia is a multifactorial disease with unknown pathogenesis. Even when recent stuPalabras claves:Communality analysis, Consensus analysis, early recognition, Gene periodization, Microarray analysis, pathogenesis, PreeclampsiaAutores:Aminael Sánchez-Rodríguez, Borges F., Cesar Paz-y-Miño, Eduardo Tejera, Germán Burgos, Maykel Cruz-Monteagudo, Natalia Dias Soeiro Cordeiro M., Rebelo I., Sánchez M.E., Yunierkis Perez-CastilloFuentes:googlescopusAdvanced In Silico Approaches for Drug Discovery: Mining Information from Multiple Biological and Chemical Data Through mtk-QSBER and pt-QSPR Strategies
ArticleAbstract: The last decade has been seeing an increase of public-private partnerships in drug discovery, mostlyPalabras claves:Box-Jenkins moving averages, CHEMBL, Knowledge generator, Mtk-QSBER models, Perturbation the-ory, Pt-QSPR modelsAutores:Alejandro Speck-Planche, Natalia Dias Soeiro Cordeiro M.Fuentes:scopusEfficient and biologically relevant consensus strategy for Parkinson's disease gene prioritization
ArticleAbstract: Background: The systemic information enclosed in microarray data encodes relevant clues to overcomePalabras claves:Co-expression networks, Consensus strategy, early recognition, Gene prioritization, Parkinson's DiseaseAutores:A. Sanchez Rodriguez, Aminael Sánchez-Rodríguez, Borges F., Cesar Paz-y-Miño, Eduardo Tejera, Maykel Cruz-Monteagudo, Morales-Helguera A., Natalia Dias Soeiro Cordeiro M., Rebelo I., Y. Perez Castillo, Yunierkis Perez-CastilloFuentes:googlerraaescopusFrom flamingo dance to (desirable) drug discovery: a nature-inspired approach
ReviewAbstract: The therapeutic effects of drugs are well known to result from their interaction with multiple intraPalabras claves:Autores:Aminael Sánchez-Rodríguez, Borges F., Eduardo Tejera, Mangiatordi G.F., Maykel Cruz-Monteagudo, Medina-Franco J.L., Natalia Dias Soeiro Cordeiro M., Nicolotti O., Schürer S.C., Yunierkis Perez-CastilloFuentes:googlescopus