QuBiLS‐MIDAS: A parallel free‐software for molecular descriptors computation based on multilinear algebraic maps


Abstract:

The present report introduces the QuBiLS‐MIDAS software belonging to the ToMoCoMD‐CARDD suite for the calculation of three‐dimensional molecular descriptors (MDs) based on the two‐linear (bilinear), three‐linear, and four‐linear (multilinear or N‐linear) algebraic forms. Thus, it is unique software that computes these tensor‐based indices. These descriptors, establish relations for two, three, and four atoms by using several (dis‐)similarity metrics or multimetrics, matrix transformations, cutoffs, local calculations and aggregation operators. The theoretical background of these N‐linear indices is also presented. The QuBiLS‐MIDAS software was developed in the Java programming language and employs the Chemical Development Kit library for the manipulation of the chemical structures and the calculation of the atomic properties. This software is composed by a desktop user‐friendly interface and an Abstract …

Año de publicación:

2014

Keywords:

  • N-tuple spatial-(Dis)similarity matrix
  • double stochastic and mutual probability matrices
  • ToMoCoMD-CARDD
  • chemical development kit
  • N-tuple simple stochastic
  • QuBiLS-MIDAS
  • Speed up
  • Java language
  • 3D N-linear indices
  • Scalability

Fuente:

scopusscopus
googlegoogle

Tipo de documento:

Other

Estado:

Acceso abierto

Áreas de conocimiento:

  • Ingeniería química
  • Software
  • Ciencias de la computación

Áreas temáticas de Dewey:

  • Programación informática, programas, datos, seguridad
  • Ciencias de la computación
Procesado con IAProcesado con IA

Objetivos de Desarrollo Sostenible:

  • ODS 3: Salud y bienestar
  • ODS 9: Industria, innovación e infraestructura
  • ODS 17: Alianzas para lograr los objetivos
  • ODS 8: Trabajo decente y crecimiento económico
Procesado con IAProcesado con IA