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First case of within-host co-infection of different SARS-CoV-2 variants in Ecuador
ArticleAbstract: Background: COVID-19 infection caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2Palabras claves:co-infection, covid19, Genome sequencing, NGS, SARS-COV-2Autores:Andrade-Molina D.M., Belén Prado-Vivar, Bernardo M. Gutierrez, Erika B. Muñoz, Fernandez-Cadena J.C., Gabriel Morey León, Gabriel Trueba, Juan José Guadalupe, Mateo Carvajal, Michelle Grunauer Andrade, Mónica Becerra-Wong, Patricio Rojas Silva, Paul Andres Cardenas, Paul Cardenas, Rosa Bayas, Stefanie Proaño, Sully Márquez, Verónica Alexandra Barragán TeránFuentes:googlescopusFirst complete genome sequences of Zika virus isolated from febrile patient sera in Ecuador
ArticleAbstract: Here, we present the complete genome sequences of two Zika virus (ZIKV) strains, EcEs062_16 and EcEsPalabras claves:Autores:Bonsall D., Carroll M.W., Christopher H. Logue, Coloma J., Gabriel Trueba, J. Carrera, Joseph Neil Spindel Eisenberg, Klenerman P., Lewandowski K., Loman N.J., Paz V., Powell R., Pullan S.T., Pybus O.G., Quick J., Sully Márquez, Thézé J.Fuentes:scopusFirst detection of SARS-CoV-2 variant B.1.1.529 (Omicron) in Ecuador
ArticleAbstract: The National Institute of Research and Public Health reported the first local record of the OmicronPalabras claves:covid-19, Genomics, Omicron, SARS-COV-2, variant of concernAutores:Andrés Carrazco-Montalvo, Ariana León-Sosa, Belén Prado-Vivar, Bernardo M. Gutierrez, Fuertes B., Gabriel Trueba, Guizado-Herrera D., Isaac Armendáriz-Castillo, Juan José Guadalupe, Michelle Grunauer Andrade, Morales D., Patino L., Patricio Rojas Silva, Paul Andres Cardenas, Ramos-Sarmiento D., Rubén Armas-Gonzalez, Sully Márquez, Tello C.L., Verónica Alexandra Barragán Terán, Wong M.B.Fuentes:scopusGenomic epidemiology of SARS-CoV-2 transmission lineages in Ecuador
ArticleAbstract: Characterisation of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) genetic diversity tPalabras claves:Molecular epidemiology, phylogenetics, Phylogeography, SARS-COV-2, Transmission lineagesAutores:Andrade-Molina D.M., Andrés Carrazco-Montalvo, Belén Prado-Vivar, Bernardo M. Gutierrez, Brünink S., Bruno A., Coloma J., da Silva Candido D., de Mora D., Drexler J.F., du Plessis L., Escalera-Zamudio M., Faria N.R., Fernandez-Cadena J.C., Gabriel Morey León, Gabriel Trueba, Juan José Guadalupe, Kraemer M.U.G., Kühne A., Manuel V. Gónzalez, McCrone J.T., Mestanza O., Michelle Grunauer Andrade, Mónica Becerra-Wong, Moreira-Soto A., Olmedo M., Orlando S.A., Patino L., Patricio Rojas Silva, Paul Andres Cardenas, Paul Cardenas, Portugal D., Pybus O.G., Rubén Armas-Gonzalez, Sander A.L., Sevillano G., Sully Márquez, Verónica Alexandra Barragán Terán, Zurita JeanneteFuentes:googlescopusA Chikungunya Outbreak in a Dengue-endemic Region in Rural Northern Coastal Ecuador
ArticleAbstract: Dengue virus (DENV) reemerged in the Americas in the 1980s and 1990s, whereas chikungunya virus (CHIPalabras claves:Autores:Coloma J., Gabriel Trueba, Joseph Neil Spindel Eisenberg, Lee G.O., Paulina Andrade, Sully Márquez, Zuniga J.Fuentes:scopusA case of SARS-CoV-2 reinfection in Ecuador
OtherAbstract:Palabras claves:Autores:Belén Prado-Vivar, Bernardo M. Gutierrez, Gabriel Trueba, Juan José Guadalupe, Michelle Grunauer Andrade, Mónica Becerra-Wong, Patricio Rojas Silva, Paul Andres Cardenas, Paul Cardenas, Sully Márquez, Verónica Alexandra Barragán TeránFuentes:googlescopusA dengue outbreak in a rural community in Northern Coastal Ecuador: An analysis using unmanned aerial vehicle mapping
ArticleAbstract: Dengue is recognized as a major health issue in large urban tropical cities but is also observed inPalabras claves:Autores:Berrocal V.J., Carlos Mena, Cevallos V.E., Coloma J., Gabriel Trueba, Joseph Neil Spindel Eisenberg, Lee G.O., Luis E. Vasco, Morrison A.C., Patricio Ponce, Sully Márquez, Trostle J.A., Uruchima J., Van Engen A., William Cevallos, Zuniga-Moya J.C.Fuentes:googlescopusAdapting Rapid Diagnostic Tests to Detect Historical Dengue Virus Infections
ArticleAbstract: The only licensed dengue vaccine, Dengvaxia®, increases risk of severe dengue when given to individuPalabras claves:DENGUE, dengue vaccine, pre-vaccination screening, rapid diagnostic test, zikaAutores:Andrea Pinãna López, Carrillo F.B., Chambers A., Chen H.W., Collingwood A., Coloma J., Echegaray F., Gabriel Trueba, Harris A., Harris E., Hernandez S., Joseph Neil Spindel Eisenberg, Katzelnick L.C., Laing I., Laing P., McLennan N., Messer W., Montoya M., Philip John Cooper, Sandra Vivero Villagran, Simons M.P., Sugiharto V.A., Sully Márquez, Wu S.J.Fuentes:scopusAltered TMPRSS2 usage by SARS-CoV-2 Omicron impacts infectivity and fusogenicity
ArticleAbstract: The SARS-CoV-2 Omicron BA.1 variant emerged in 20211 and has multiple mutations in its spike proteinPalabras claves:Autores:Abdullahi A., Baker S., Belén Prado-Vivar, Bernardo M. Gutierrez, Betancourt A., Bower G., Brevini T., Bucke A., Bullman B., Calder J., Canna L., Charles O.J., Cossetti C., de Sa A., Domingo J., Dougan G., Dunmore B.J., Elmer A., Emma Jones, Epping M., Erika B. Muñoz, Fatihi S., Fawke S., Ferreira I.A.T.M., Fuller S., Gabriel Trueba, Gerber P.P., Gleadall N., Goonawardane N., Graf S., Grenfell R., Harris J., Hess C., Hewitt S., Hinch A., Hodgson J., Huang C., Hunter K., Ikeda T., Jackson S., Jarvis I., Jose S., Juan José Guadalupe, Kemp S.A., Kennet J., Kimura I., Kingston N., Kourampa J., Krishna B., Kuramochi J., Legchenko E., Lehner P.J., Lyons P.A., Mallery D.L., Manuel Eduardo Baldeón, Martin J., Matara C., Mateo Caravajal, Matheson N.J., Maxwell P., Meadows A., Meng B., Mescia F., Michelle Grunauer Andrade, Mitsunaga S., Mónica Becerra-Wong, Nice F., Omarjee O., Ouwehand W.H., O’Brien C., O’Donnell C., Papa G., Patricio Rojas Silva, Paul Andres Cardenas, Paul Cardenas, Perera M., Pointon L., Potts M., Price J., Publico C., Rastall R., Rathore S., Ribeiro C., Richoz N., Romashova V., Rowlands J., Ruffolo V., Saito A., Saunders C., Shaw A., Shih J., Shirakawa K., Stefanucci L., Strezlecki M., Sully Márquez, Summers C., Sutcliffe R., Takaori-Kondo A., Tan T.S., Thaventhiran J.E.D., Tilly T., Tong Z., Tordesillas H., Toshner M., Toyoda M., Treacy C., Turner L., Ueno T., Verónica Alexandra Barragán Terán, Weekes M.P., Wood J., Wylot M., Yamasoba D., Zepeda S.K.Fuentes:googlescopusMetagenome of a bronchoalveolar lavage fluid sample from a confirmed COVID-19 case in quito, ecuador, obtained using oxford nanopore MinION technology
ArticleAbstract: We report the metagenome analysis of a bronchoalveolar lavage (BAL) fluid sample from a confirmed coPalabras claves:Autores:Belén Prado-Vivar, Bernardo M. Gutierrez, Coloma J., Gabriel Trueba, Juan José Guadalupe, Manuel Jibaja, Michelle Grunauer Andrade, Mónica Becerra-Wong, Patricio Rojas Silva, Paul Andres Cardenas, Sully Márquez, Tobar M., Verónica Alexandra Barragán TeránFuentes:googlescopus