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Colombos: Access port for cross-platform bacterial expression compendia
ArticleAbstract: Background: Microarrays are the main technology for large-scale transcriptional gene expression profPalabras claves:Autores:Aminael Sánchez-Rodríguez, de Smet R., Engelen K., Fierro A.C., Fu Q., Lemmens K., Marchal K., Meysman P.Fuentes:googlescopusAn alignment-free approach for eukaryotic ITS2 annotation and phylogenetic inference
ArticleAbstract: The ITS2 gene class shows a high sequence divergence among its members that have complicated its annPalabras claves:Autores:Agüero-Chapin G., Aminael Sánchez-Rodríguez, Antunes A., Hidalgo-Yanes P.I., Marchal K., Molina-Ruiz R., Vasconcelos V., Yunierkis Perez-CastilloFuentes:googlescopusA combined approach to study the protein glycosylation potential of Lactobacillus rhamnosus GG (LGG).
ArticleAbstract:Palabras claves:Autores:Aminael Sánchez-Rodríguez, De Keersmaecker S., Lebeer S., Marchal K., Schoofs G., Tytgat H., Vanderleyden J., Verhoeven T.Fuentes:googlescopusCatabolic task division between two near-isogenic subpopulations co-existing in a herbicide-degrading bacterial consortium: consequences for the interspecies consortium metabolic model
ArticleAbstract: Variovorax sp. WDL1 mediates hydrolysis of the herbicide linuron into 3,4-dichloroaniline (DCA) andPalabras claves:Autores:Albers P., Aminael Sánchez-Rodríguez, De Mot R., Horemans B., Lavigne R., Lood C., Marchal K., Özturk B., Springael D., van Noort V.Fuentes:googlescopusFrequency-based haplotype reconstruction from deep sequencing data of bacterial populations
ArticleAbstract: Clonal populations accumulate mutations over time, resulting in different haplotypes. Deep sequencinPalabras claves:Autores:A. Dubey, A. Sanchez Rodriguez, Aminael Sánchez-Rodríguez, B. Van Den Bergh, Dubey A., Fostier J., H. Steenackers, J. Fostier, J. Michiels, K. Marchal, Marchal K., Michiels J., Pulido-Tamayo S., S. Pulido-Tamayo, Steenackers H., Swings T., T. Swings, Van Den Bergh B.Fuentes:googlerraaescopusGenome sequence of Rhizobium etli CNPAF512, a nitrogen-fixing symbiont isolated from bean root nodules in Brazil
OtherAbstract: Rhizobium etli is a Gram-negative soil-dwelling alphaproteobacterium that carries out symbiotic biolPalabras claves:Autores:Aminael Sánchez-Rodríguez, Beullens S., Fauvart M., Marchal K., Michiels J.Fuentes:googlescopusGenome-scale co-expression network comparison across Escherichia coli and Salmonella enterica serovar typhimurium reveals significant conservation at the regulon level of local regulators despite their dissimilar lifestyles
ArticleAbstract: Availability of genome-wide gene expression datasets provides the opportunity to study gene expressiPalabras claves:Autores:Aminael Sánchez-Rodríguez, Hosseinkhan N., Marchal K., Masoudi-Nejad A., Narimani Z., Zarrineh P.Fuentes:googlescopusExpression divergence between Escherichia coli and Salmonella enterica serovar typhimurium reflects their lifestyles
ArticleAbstract: Escherichia coli K12 is a commensal bacteria and one of the best-studied model organisms. SalmonellaPalabras claves:ESCHERICHIA coli, expression conservation, expression divergence, Gene Expression, pathogenesis, salmonellaAutores:Aminael Sánchez-Rodríguez, Engelen K., Fu Q., Marchal K., Meysman P.Fuentes:googlescopusOmics derived networks in bacteria
ReviewAbstract: Understanding the cellular behavior from a systems perspective requires the identification of functiPalabras claves:bacteria, Dataintegration, Molecular networks, Network inference, Omics dataAutores:Aminael Sánchez-Rodríguez, Cloots L., Marchal K.Fuentes:googlescopusImproved linkage analysis of Quantitative Trait Loci using bulk segregants unveils a novel determinant of high ethanol tolerance in yeast
ArticleAbstract: Background: Bulk segregant analysis (BSA) coupled to high throughput sequencing is a powerful methodPalabras claves:Autores:Aminael Sánchez-Rodríguez, Duitama J., Foulquié-Moreno M.R., Goovaerts A., Hubmann G., Marchal K., Pulido-Tamayo S., Thevelein J.M., Verstrepen K.J.Fuentes:googlescopus