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Frontiers in Chemistry(1)
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Journal of Chemical Information and Modeling(1)
Methods in Molecular Biology(1)
Alignment-free methods for the detection and specificity pbkp_rediction of adenylation domains
Book PartAbstract: Identifying adenylation domains (A-domains) and their substrate specificity can aid the detection ofPalabras claves:Adenylation domains, Alignment-free models, NRPS, topological indices, Transductive support vector machinesAutores:Agüero-Chapin G., Aminael Sánchez-Rodríguez, Antunes A., Pérez-Machado G., Santos M.Fuentes:googlescopusFuzzy spherical truncation-based multi-linear protein descriptors: From their definition to application in structural-related pbkp_redictions
ArticleAbstract: This study introduces a set of fuzzy spherically truncated three-dimensional (3D) multi-linear descrPalabras claves:3D-protein descriptors, folding rate, fuzzy membership degree, fuzzy membership functions, MuLiMs-MCoMPAs, multi-linear algebraic forms, SCOP structural classes tensor algebra-based fuzzy spherically truncated descriptors for protein Science, spherical truncationAutores:Agüero-Chapin G., Antunes A., César R. García-Jacas, Ernesto Contreras-Torres, Julio E. Terán, Yovani Marrero-PonceFuentes:scopusMMM-QSAR recognition of ribonucleases without alignment: Comparison with an HMM model and isolation from Schizosaccharomyces pombe, pbkp_rediction, and experimental assay of a new sequence
ArticleAbstract: The study of type III RNases constitutes an important area in molecular biology. It is known that thPalabras claves:Autores:Agüero-Chapin G., Aminael Sánchez-Rodríguez, de la Riva G.A., González‐díaz H., Podda G., Rodríguez E., Vazquez-Padron R.I.Fuentes:googlescopusShadowcaster: Compositional methods under the shadow of phylogenetic models to detect horizontal gene transfers in prokaryotes
ArticleAbstract: Horizontal gene transfer (HGT) plays an important role for evolutionary innovations within prokaryotPalabras claves:Horizontal gene transfer, Hybrid approach, Implicit phylogenetic model, Parametric methodAutores:Agüero-Chapin G., Aminael Sánchez-Rodríguez, Antunes A., Daniela Sánchez-Soto, Eduardo Tejera, Vinicio Danilo Armijos-Jaramillo, Yunierkis Perez-CastilloFuentes:scopus